Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CTCF

Cell type

Cell type Class
Blood
Cell type
Monocytes
MeSH Description
Large, phagocytic mononuclear leukocytes produced in the vertebrate BONE MARROW and released into the BLOOD; contain a large, oval or somewhat indented nucleus surrounded by voluminous cytoplasm and numerous organelles.

Attributes by original data submitter

Sample

source_name
Blood monocytes
chip antibody
CTCF
cell type
Blood monocytes
donor
A

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg38

Number of total reads
16845740
Reads aligned (%)
44.4
Duplicates removed (%)
43.5
Number of peaks
3470 (qval < 1E-05)

hg19

Number of total reads
16845740
Reads aligned (%)
43.8
Duplicates removed (%)
45.0
Number of peaks
3562 (qval < 1E-05)

Base call quality data from DBCLS SRA